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Strain Groups
Bacillus anthracis (
18
)
Bacillus cereus (
700
)
Burkholderia pseudomallei (
164
)
Campylobacter jejuni (
137
)
Chlamydophila pneumoniae (
4
)
Clostridium perfringens (
553
)
Escherichia coli (
455
)
Francisella tularensis (
66
)
Haemophilus influenzae (
882
)
Legionella pneumophila (
806
)
Mycobacterium tuberculosis (
28
)
Mycoplasma hyopneumoniae (
221
)
Neisseria meningitidis (
539
)
Salmonella enterica (
744
)
Shigella flexneri (
113
)
Staphylococcus aureus (
107
)
Streptococcus agalactiae (
89
)
Streptococcus pyogenes (
102
)
Streptococcus thermophilus (
90
)
Yersinia pestis (
23
)
FAQ
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Variable Region Finder
Variable Regions from Haemophilus influenzae
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5
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36
Percentage ID Cutoff:
Position in strain
Haemophilus influenzae 86028NP
Percentage
Identity
Maximum
Length
1306485-1306736
87.73
273
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1308533-1308894
89.23
361
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1309685-1310195
83.35
560
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1310539-1310895
81.05
406
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1310989-1311194
80
341
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1311896-1312144
88.4
248
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1313495-1313847
87.58
352
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1313946-1314200
84.79
352
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1314395-1314594
78.29
301
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1315045-1315396
89.24
351
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1316245-1316739
85.38
558
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1316245-1316739
84.6
564
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1317394-1317892
84.69
507
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1317644-1317892
78.92
298
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1317841-1318092
87.37
251
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1318091-1318685
76.35
708
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1319273-1319587
85.91
377
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1323537-1323914
82.2
377
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1324451-1324764
88.32
351
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1326263-1326464
88.94
218
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1326587-1327114
89.72
528
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1330482-1330837
82.21
355
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1331451-1331712
12.8
3376
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1332160-1332562
70.76
540
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1332960-1333312
83.91
352
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
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