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Strain Groups
Bacillus anthracis (
18
)
Bacillus cereus (
700
)
Burkholderia pseudomallei (
164
)
Campylobacter jejuni (
137
)
Chlamydophila pneumoniae (
4
)
Clostridium perfringens (
553
)
Escherichia coli (
455
)
Francisella tularensis (
66
)
Haemophilus influenzae (
882
)
Legionella pneumophila (
806
)
Mycobacterium tuberculosis (
28
)
Mycoplasma hyopneumoniae (
221
)
Neisseria meningitidis (
539
)
Salmonella enterica (
744
)
Shigella flexneri (
113
)
Staphylococcus aureus (
107
)
Streptococcus agalactiae (
89
)
Streptococcus pyogenes (
102
)
Streptococcus thermophilus (
90
)
Yersinia pestis (
23
)
FAQ
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Variable Region Finder
Variable Regions from Haemophilus influenzae
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Percentage ID Cutoff:
Position in strain
Haemophilus influenzae 86028NP
Percentage
Identity
Maximum
Length
1727901-1728174
83.84
301
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1729372-1729873
89.09
501
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1730004-1730423
87.44
419
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1730624-1730825
88.08
203
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1731174-1731525
81.89
351
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1732454-1732703
86.9
301
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1734801-1735626
32.57
2791
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1736708-1736909
87.56
201
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1738892-1739158
89.79
266
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1739492-1739808
87.04
316
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1742293-1742570
79.96
277
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1751271-1751520
84.13
301
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1751969-1752286
85.58
317
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1753385-1753847
89.37
501
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1756620-1756936
83.43
316
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1757070-1757321
88.69
302
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1757335-1757650
80.99
315
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1759570-1759971
87.54
401
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1760469-1760720
88.33
251
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1762318-1762531
85.65
213
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1763330-1763531
88.42
202
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1763852-1764198
81.11
396
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1763997-1764381
84.83
421
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1764397-1764698
80.36
301
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
1764830-1765080
77.8
250
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
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