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Strain Groups
Bacillus anthracis (
18
)
Bacillus cereus (
700
)
Burkholderia pseudomallei (
164
)
Campylobacter jejuni (
137
)
Chlamydophila pneumoniae (
4
)
Clostridium perfringens (
553
)
Escherichia coli (
455
)
Francisella tularensis (
66
)
Haemophilus influenzae (
882
)
Legionella pneumophila (
806
)
Mycobacterium tuberculosis (
28
)
Mycoplasma hyopneumoniae (
221
)
Neisseria meningitidis (
539
)
Salmonella enterica (
744
)
Shigella flexneri (
113
)
Staphylococcus aureus (
107
)
Streptococcus agalactiae (
89
)
Streptococcus pyogenes (
102
)
Streptococcus thermophilus (
90
)
Yersinia pestis (
23
)
FAQ
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Variable Region Finder
Variable Regions from Legionella pneumophila
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2
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5
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7
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9
10
11
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16
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19
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33
Percentage ID Cutoff:
Position in strain
Legionella pneumophila Corby
Percentage
Identity
Maximum
Length
2926187-2926525
85.53
338
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2927918-2928169
89.09
251
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2930201-2930543
88.89
342
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2930337-2930600
87.96
263
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2931101-2932993
86.5
1901
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2933437-2933669
83.6
232
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2933437-2933669
87.53
232
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2934992-2935219
84.58
227
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2935318-2935738
82.29
420
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2938851-2939123
89.69
272
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2940101-2940368
88.63
267
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2940717-2941149
82.68
432
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2945574-2945841
85.26
267
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2946624-2946891
82.71
267
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2947074-2947398
77.94
324
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2951482-2951797
79.3
315
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2955801-2956134
89.23
333
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2955883-2956134
86.73
251
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2956968-2957184
86.87
216
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2959247-2959547
89.69
300
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2959247-2959547
88.61
300
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2959716-2959917
86.07
201
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2961381-2961697
86.07
316
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2963181-2963447
76.66
266
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
2968916-2969167
88.25
251
Strain Position
Max length and direction
Features
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
Alternative positions
Direction and length
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